SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40939

Signal sequence   MMQKCLSPKTLIAALVVLSA

Length  20

Organism  Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)

UniProt ID  Q5LWX7,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40939.cif

Structure  SPKB40939.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2117.69494

Aliphatic index  141.5

Isoelectric point  9.676237541

Charge (pH=7)   1.935419516

Topological polar surface area  763.25

Aromaticity  0

Average rotatable bonds  3.55

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  30

X logP energy  -4.9572

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.