SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40913

Signal sequence   MDIPRSLRHPEILLVLLLSEITDICQA

Length  27

Organism  Xenopus laevis (African clawed frog)

UniProt ID  Q5HZN7,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40913.cif

Structure  SPKB40913.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3089.70194

Aliphatic index  158.8888889

Isoelectric point  4.538615725

Charge (pH=7)   -1.968644734

Topological polar surface area  1207.8

Aromaticity  0

Average rotatable bonds  3.777777778

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  41

X logP energy  -7.36246

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.