SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40795

Signal sequence   MGTAKPPGRGCGALPRWLLGAALLLGLRLCMELRHAGS

Length  38

Organism  Rattus norvegicus (Rat)

UniProt ID  Q5BK01,

Motif  1..38



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40795.cif

Structure  SPKB40795.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3944.79724

Aliphatic index  105.5263158

Isoelectric point  11.30845618

Charge (pH=7)   3.966410802

Topological polar surface area  1509.5

Aromaticity  0.026315789

Average rotatable bonds  3.342105263

Number of hydrogen bond donors  56

Number of hydrogen bond acceptors  52

X logP energy  -12.73572

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.