SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40752

Signal sequence   MDSALVLFAFLFHCLNVATA

Length  20

Organism  Oryzias latipes (Japanese rice fish) (Japanese killifish)

UniProt ID  Q588F9,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40752.cif

Structure  SPKB40752.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2183.61124

Aliphatic index  127

Isoelectric point  5.289877379

Charge (pH=7)   -0.972634841

Topological polar surface area  765.75

Aromaticity  0.15

Average rotatable bonds  3.35

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -3.7145

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.