SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40751

Signal sequence   MDYTLALALSLLQLSMC

Length  17

Organism  Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)

UniProt ID  Q588F8,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40751.cif

Structure  SPKB40751.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1886.31004

Aliphatic index  149.4117647

Isoelectric point  3.749971056

Charge (pH=7)   -1.064394347

Topological polar surface area  690.23

Aromaticity  0.058823529

Average rotatable bonds  3.647058824

Number of hydrogen bond donors  25

Number of hydrogen bond acceptors  27

X logP energy  -4.0386

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.