SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40648

Signal sequence   MKIMNKQSITIFLIICFLINLILS

Length  24

Organism  Dictyostelium discoideum (Social amoeba)

UniProt ID  Q54VJ1,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40648.cif

Structure  SPKB40648.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2810.59384

Aliphatic index  178.75

Isoelectric point  9.676237541

Charge (pH=7)   1.935419516

Topological polar surface area  974.62

Aromaticity  0.083333333

Average rotatable bonds  4.083333333

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -2.3831

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.