SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40629

Signal sequence   MDFLNKKIQKILFICILSFLIVNLTKS

Length  27

Organism  Dictyostelium discoideum (Social amoeba)

UniProt ID  Q54QZ5,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40629.cif

Structure  SPKB40629.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3183.98784

Aliphatic index  155.1851852

Isoelectric point  10.34123348

Charge (pH=7)   2.935275932

Topological polar surface area  1151.26

Aromaticity  0.111111111

Average rotatable bonds  4.148148148

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  41

X logP energy  -4.0965

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.