SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40579

Signal sequence   MKYSYLLLILLLSNLYKEGFS

Length  21

Organism  Dictyostelium discoideum (Social amoeba)

UniProt ID  Q54FD8,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40579.cif

Structure  SPKB40579.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2509.04164

Aliphatic index  148.5714286

Isoelectric point  9.032129894

Charge (pH=7)   0.996618112

Topological polar surface area  899.13

Aromaticity  0.19047619

Average rotatable bonds  4

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -2.0897

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.