SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40500

Signal sequence   MNRRNLLKASMALAAYGSVSASGLFAARA

Length  29

Organism  Pseudomonas syringae pv. syringae (strain B728a)

UniProt ID  Q4ZL60,

Motif  1..29



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40500.cif

Structure  SPKB40500.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2998.51444

Aliphatic index  91.37931034

Isoelectric point  12.22713629

Charge (pH=7)   3.996828917

Topological polar surface area  1277.17

Aromaticity  0.068965517

Average rotatable bonds  3.448275862

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  43

X logP energy  -15.42889

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.