SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40475

Signal sequence   MSQVIRTLALTGLALAGLSG

Length  20

Organism  Xanthomonas campestris pv. campestris (strain 8004)

UniProt ID  Q4URB9,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40475.cif

Structure  SPKB40475.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1972.37374

Aliphatic index  146.5

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  802.13

Aromaticity  0

Average rotatable bonds  3.3

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  28

X logP energy  -8.47593

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.