SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40378

Signal sequence   MSKDRDGRRTSRRGTLKKIGGFSLGALSFGAVGRTQAATGSSVTTA

Length  46

Organism  Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei)

UniProt ID  Q48236,

Motif  1..46



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40378.cif

Structure  SPKB40378.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4715.32804

Aliphatic index  57.39130435

Isoelectric point  12.51641045

Charge (pH=7)   6.997972298

Topological polar surface area  2182.73

Aromaticity  0.043478261

Average rotatable bonds  3.543478261

Number of hydrogen bond donors  83

Number of hydrogen bond acceptors  72

X logP energy  -33.47998

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.