SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40328

Signal sequence   MARAAATQLVLVAMVAAMLIVATDA

Length  25

Organism  Hordeum vulgare (Barley)

UniProt ID  Q43875,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40328.cif

Structure  SPKB40328.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2502.08724

Aliphatic index  144.8

Isoelectric point  6.338718596

Charge (pH=7)   -0.001572528

Topological polar surface area  944.47

Aromaticity  0

Average rotatable bonds  3.24

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -6.95463

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.