SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40327

Signal sequence   MASSAFVKFTCALVMCMMVAAPLAEA

Length  26

Organism  Beta vulgaris (Sugar beet)

UniProt ID  Q43748,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40327.cif

Structure  SPKB40327.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2694.35244

Aliphatic index  90.38461538

Isoelectric point  6.13535235

Charge (pH=7)   -0.124485044

Topological polar surface area  906.04

Aromaticity  0.076923077

Average rotatable bonds  3.269230769

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  38

X logP energy  -6.0594

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.