SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40315

Signal sequence   MASSMSLKLACVVVLCMVVGAPLAQG

Length  26

Organism  Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)

UniProt ID  Q43129,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40315.cif

Structure  SPKB40315.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2579.24634

Aliphatic index  131.1538462

Isoelectric point  8.229691165

Charge (pH=7)   0.873739834

Topological polar surface area  911.83

Aromaticity  0

Average rotatable bonds  3.230769231

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  37

X logP energy  -7.6784

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.