SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40311

Signal sequence   MSLKLACVVVLCMVVGAPLAQG

Length  22

Organism  Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)

UniProt ID  Q42762,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40311.cif

Structure  SPKB40311.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2202.81854

Aliphatic index  150.4545455

Isoelectric point  8.229691165

Charge (pH=7)   0.873739834

Topological polar surface area  754.97

Aromaticity  0

Average rotatable bonds  3.227272727

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  30

X logP energy  -4.3752

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.