SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40307

Signal sequence   MKIIFVFALLAIAACSATA

Length  19

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q42465,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40307.cif

Structure  SPKB40307.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1954.45964

Aliphatic index  149.4736842

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  653.6

Aromaticity  0.105263158

Average rotatable bonds  3.263157895

Number of hydrogen bond donors  24

Number of hydrogen bond acceptors  25

X logP energy  -2.199

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.