SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40294

Signal sequence   MSFRCFSFALFLLLLTFISHVSA

Length  23

Organism  Medicago truncatula (Barrel medic) (Medicago tribuloides)

UniProt ID  Q40374,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40294.cif

Structure  SPKB40294.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2651.22274

Aliphatic index  123.0434783

Isoelectric point  8.557478416

Charge (pH=7)   1.026915363

Topological polar surface area  895.25

Aromaticity  0.217391304

Average rotatable bonds  3.608695652

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  33

X logP energy  -3.48823

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.