SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40163

Signal sequence   MGMSKSIKVILSLALVVFLALAATKVEA

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q3ECL0,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40163.cif

Structure  SPKB40163.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2904.64664

Aliphatic index  156.7857143

Isoelectric point  10.506919

Charge (pH=7)   1.998874321

Topological polar surface area  1045.3

Aromaticity  0.035714286

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  39

X logP energy  -5.4761

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.