SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40159

Signal sequence   MAKNLNSVSFIVLLLVLLVASTEILKSDA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q3E8R5,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40159.cif

Structure  SPKB40159.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3102.76364

Aliphatic index  171.3793103

Isoelectric point  6.492975461

Charge (pH=7)   -0.000384161

Topological polar surface area  1192.09

Aromaticity  0.034482759

Average rotatable bonds  3.655172414

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  42

X logP energy  -8.2346

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.