SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40129

Signal sequence   MKRLAVSILCLALAG

Length  15

Organism  Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)

UniProt ID  Q39YJ8,

Motif  1..15



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40129.cif

Structure  SPKB40129.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1559.00434

Aliphatic index  169.3333333

Isoelectric point  9.833242293

Charge (pH=7)   1.935711238

Topological polar surface area  578.87

Aromaticity  0

Average rotatable bonds  3.533333333

Number of hydrogen bond donors  22

Number of hydrogen bond acceptors  21

X logP energy  -3.16943

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.