SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40123

Signal sequence   MKQVRLLPSATVRAACAVAVAAFAAG

Length  26

Organism  Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)

UniProt ID  Q39C57,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40123.cif

Structure  SPKB40123.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2573.11334

Aliphatic index  109.2307692

Isoelectric point  11.48119255

Charge (pH=7)   2.935707927

Topological polar surface area  1015.4

Aromaticity  0.038461538

Average rotatable bonds  3.115384615

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  35

X logP energy  -10.22906

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.