SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40120

Signal sequence   MAKFASIITLLFAALVVFAAFEAPTMVEA

Length  29

Organism  Brassica napus (Rape)

UniProt ID  Q39313,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40120.cif

Structure  SPKB40120.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3073.74224

Aliphatic index  124.8275862

Isoelectric point  4.258147297

Charge (pH=7)   -0.998760489

Topological polar surface area  1030.64

Aromaticity  0.137931034

Average rotatable bonds  3.310344828

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  38

X logP energy  -3.0739

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.