SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40117

Signal sequence   MQTRNAFSWLKKQITRSISVSLMIYILTRTSISSA

Length  35

Organism  Nicotiana tomentosiformis (Tobacco)

UniProt ID  Q33C20,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40117.cif

Structure  SPKB40117.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4032.77534

Aliphatic index  103.1428571

Isoelectric point  12.24771523

Charge (pH=7)   4.996533884

Topological polar surface area  1678.28

Aromaticity  0.085714286

Average rotatable bonds  3.914285714

Number of hydrogen bond donors  63

Number of hydrogen bond acceptors  58

X logP energy  -17.70919

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.