SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB40099

Signal sequence   MQKKDVCEYITKWVSVTISTLVTIGVLVFPLSSEA

Length  35

Organism  Zygnema circumcarinatum (Green alga)

UniProt ID  Q32RJ3,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB40099.cif

Structure  SPKB40099.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3886.61764

Aliphatic index  119.4285714

Isoelectric point  6.403575181

Charge (pH=7)   -0.061729203

Topological polar surface area  1474.84

Aromaticity  0.085714286

Average rotatable bonds  3.628571429

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  54

X logP energy  -10.8013

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.