SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39948

Signal sequence   MTIKKFLPLLLSSLMVYSLILLPIISG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V4G6,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39948.cif

Structure  SPKB39948.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3004.84984

Aliphatic index  184.0740741

Isoelectric point  10.24760792

Charge (pH=7)   1.996543817

Topological polar surface area  975.76

Aromaticity  0.074074074

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  38

X logP energy  -0.8387

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.