SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39946

Signal sequence   MTTTKTMLVAFVLTLFFVISSVHC

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V4G3,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39946.cif

Structure  SPKB39946.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2690.31294

Aliphatic index  117.5

Isoelectric point  8.552755748

Charge (pH=7)   1.026623641

Topological polar surface area  928.93

Aromaticity  0.125

Average rotatable bonds  3.541666667

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  37

X logP energy  -5.4755

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.