SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39945

Signal sequence   MDIRKTYVIIFFVGILTISFS

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V4G1,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39945.cif

Structure  SPKB39945.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2464.00394

Aliphatic index  139.047619

Isoelectric point  9.297356245

Charge (pH=7)   0.997282024

Topological polar surface area  871.69

Aromaticity  0.19047619

Average rotatable bonds  3.80952381

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  31

X logP energy  -2.64303

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.