SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39928

Signal sequence   MASRATSLFIFFFLISCTFMLLETNA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V4A4,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39928.cif

Structure  SPKB39928.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2975.57174

Aliphatic index  101.5384615

Isoelectric point  6.232433001

Charge (pH=7)   -0.062218605

Topological polar surface area  1054.49

Aromaticity  0.192307692

Average rotatable bonds  3.653846154

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  39

X logP energy  -6.37313

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.