SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39927

Signal sequence   MTSRAKSLFIFFFLISCTFMLLETDA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V4A3,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39927.cif

Structure  SPKB39927.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3033.65184

Aliphatic index  97.69230769

Isoelectric point  6.317413811

Charge (pH=7)   -0.062067155

Topological polar surface area  1074.72

Aromaticity  0.192307692

Average rotatable bonds  3.807692308

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  40

X logP energy  -5.66473

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.