SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39919

Signal sequence   MKSEKSADAYGTYFLLISTIFLLFIARQASS

Length  31

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V470,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39919.cif

Structure  SPKB39919.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3473.04424

Aliphatic index  100.9677419

Isoelectric point  9.121161797

Charge (pH=7)   0.997911699

Topological polar surface area  1350.02

Aromaticity  0.161290323

Average rotatable bonds  3.709677419

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  48

X logP energy  -10.79683

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.