SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39913

Signal sequence   MSASKATMLILFALFLSDILLVSIPRAEA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V459,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39913.cif

Structure  SPKB39913.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3122.81514

Aliphatic index  148.2758621

Isoelectric point  6.494323083

Charge (pH=7)   -0.0000924389

Topological polar surface area  1133

Aromaticity  0.068965517

Average rotatable bonds  3.551724138

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  41

X logP energy  -6.27733

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.