SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39908

Signal sequence   MKSFLVAFLIVLVFFCVEMKIGNG

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V3Y5,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39908.cif

Structure  SPKB39908.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2706.40134

Aliphatic index  133.75

Isoelectric point  8.540504393

Charge (pH=7)   0.937194639

Topological polar surface area  885.28

Aromaticity  0.166666667

Average rotatable bonds  3.75

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  33

X logP energy  -0.9168

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.