SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39903

Signal sequence   MASSSKCAFLVFLCMIVLLAPSEVHA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V3S0,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39903.cif

Structure  SPKB39903.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2768.40144

Aliphatic index  123.8461538

Isoelectric point  7.253826183

Charge (pH=7)   -0.033575953

Topological polar surface area  954.95

Aromaticity  0.076923077

Average rotatable bonds  3.384615385

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  38

X logP energy  -5.9174

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.