SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39900

Signal sequence   MKYFTLFMISYIFISIFVFSHIHDVEA

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V3Q1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39900.cif

Structure  SPKB39900.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3299.93594

Aliphatic index  111.8518519

Isoelectric point  6.499406859

Charge (pH=7)   -0.819971774

Topological polar surface area  1099.28

Aromaticity  0.259259259

Average rotatable bonds  3.851851852

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  41

X logP energy  -1.0143

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.