SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39888

Signal sequence   MEKSALIFIGILLFSTCTSIMA

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V3H5,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39888.cif

Structure  SPKB39888.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2389.95214

Aliphatic index  133.1818182

Isoelectric point  6.231833229

Charge (pH=7)   -0.062510328

Topological polar surface area  838.89

Aromaticity  0.090909091

Average rotatable bonds  3.636363636

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  33

X logP energy  -4.7733

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.