SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39887

Signal sequence   MTSSSKCLFFVFLCLAALLTPYLAEA

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V3D7,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39887.cif

Structure  SPKB39887.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2840.44654

Aliphatic index  116.5384615

Isoelectric point  6.133393515

Charge (pH=7)   -0.125335458

Topological polar surface area  966.73

Aromaticity  0.153846154

Average rotatable bonds  3.384615385

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  38

X logP energy  -4.9419

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.