SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39865

Signal sequence   MTNLYFKTAFLLSLLLLSFSYQSKLIEA

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V315,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39865.cif

Structure  SPKB39865.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3255.90304

Aliphatic index  132.5

Isoelectric point  9.121620218

Charge (pH=7)   0.997468526

Topological polar surface area  1186.38

Aromaticity  0.178571429

Average rotatable bonds  3.857142857

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  43

X logP energy  -5.6851

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.