SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39862

Signal sequence   MKSNKVTFFLGLFLVSAFC

Length  19

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V309,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39862.cif

Structure  SPKB39862.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2152.64064

Aliphatic index  97.36842105

Isoelectric point  9.676237541

Charge (pH=7)   1.935419516

Topological polar surface area  742.94

Aromaticity  0.210526316

Average rotatable bonds  3.684210526

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  28

X logP energy  -3.6212

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.