SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39855

Signal sequence   MTTKMVSSHRLLTLMVFALLLIPMISG

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2V2Y3,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39855.cif

Structure  SPKB39855.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3004.80264

Aliphatic index  140.7407407

Isoelectric point  11.65178972

Charge (pH=7)   2.088595045

Topological polar surface area  1049.11

Aromaticity  0.037037037

Average rotatable bonds  3.703703704

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  41

X logP energy  -5.42613

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.