SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39764

Signal sequence   MQTRNTFSWIKEEITRSISVSLMIYIITGASISNA

Length  35

Organism  Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)

UniProt ID  Q2L921,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Plastid

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39764.cif

Structure  SPKB39764.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3962.59154

Aliphatic index  103.1428571

Isoelectric point  9.296422935

Charge (pH=7)   1.000382474

Topological polar surface area  1644.73

Aromaticity  0.085714286

Average rotatable bonds  3.8

Number of hydrogen bond donors  60

Number of hydrogen bond acceptors  57

X logP energy  -17.12286

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.