SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39762

Signal sequence   MNNFRITIVAFLAVLVFTTTVTNS

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q2L6T6,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39762.cif

Structure  SPKB39762.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2673.16584

Aliphatic index  121.6666667

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  1045.17

Aromaticity  0.125

Average rotatable bonds  3.5

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  36

X logP energy  -9.33613

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.