SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39637

Signal sequence   MRRSDRLRCAGASLLVVLCGVFRSSFG

Length  27

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  Q28IT1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39637.cif

Structure  SPKB39637.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2957.52624

Aliphatic index  97.40740741

Isoelectric point  11.89864589

Charge (pH=7)   3.874464795

Topological polar surface area  1247.64

Aromaticity  0.074074074

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  41

X logP energy  -14.05215

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.