SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39352

Signal sequence   MEKSVSGPNIFNMKLLLLLLILTISFCYA

Length  29

Organism  Caenorhabditis elegans

UniProt ID  Q10011,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39352.cif

Structure  SPKB39352.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3273.05344

Aliphatic index  147.9310345

Isoelectric point  8.5186893

Charge (pH=7)   0.936344224

Topological polar surface area  1146

Aromaticity  0.103448276

Average rotatable bonds  3.75862069

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  43

X logP energy  -4.6518

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.