SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39350

Signal sequence   MKISKSLWSVMISILFYLTSAPPFVIC

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q0WPS2,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39350.cif

Structure  SPKB39350.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3075.81914

Aliphatic index  126.2962963

Isoelectric point  9.405774727

Charge (pH=7)   1.934569102

Topological polar surface area  1011.78

Aromaticity  0.148148148

Average rotatable bonds  3.555555556

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  40

X logP energy  -3.1359

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.