SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39338

Signal sequence   MSARISKQLRLSVPPCLA

Length  18

Organism  Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)

UniProt ID  Q0VFL4,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39338.cif

Structure  SPKB39338.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1970.42224

Aliphatic index  113.8888889

Isoelectric point  11.48119255

Charge (pH=7)   2.935707927

Topological polar surface area  794.04

Aromaticity  0

Average rotatable bonds  3.555555556

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  28

X logP energy  -7.88666

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.