SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39271

Signal sequence   MRVAATTRPASSSAAAPLPLFLLLAVAAAAAA

Length  32

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q0JNR2,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39271.cif

Structure  SPKB39271.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3051.64094

Aliphatic index  119.6875

Isoelectric point  12.50010931

Charge (pH=7)   1.997977677

Topological polar surface area  1164

Aromaticity  0.03125

Average rotatable bonds  2.8125

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  41

X logP energy  -11.99226

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.