SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39167

Signal sequence   MRLSASLFHIALVTVLLVLAG

Length  21

Organism  Shewanella frigidimarina (strain NCIMB 400)

UniProt ID  Q087I6,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39167.cif

Structure  SPKB39167.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2224.77644

Aliphatic index  185.7142857

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  796.59

Aromaticity  0.047619048

Average rotatable bonds  3.428571429

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  28

X logP energy  -3.33363

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.