SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39162

Signal sequence   MNNLAKWLTLVLIVLTTPARA

Length  21

Organism  Shewanella frigidimarina (strain NCIMB 400)

UniProt ID  Q084K1,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39162.cif

Structure  SPKB39162.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2338.88024

Aliphatic index  153.3333333

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  887.11

Aromaticity  0.047619048

Average rotatable bonds  3.523809524

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -4.98863

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.