SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39127

Signal sequence   MKFNVKMLSVTLGLFTSHAFA

Length  21

Organism  Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)

UniProt ID  Q06555,

Motif  1..21



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39127.cif

Structure  SPKB39127.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2342.84284

Aliphatic index  92.85714286

Isoelectric point  10.80542203

Charge (pH=7)   2.088303323

Topological polar surface area  850.05

Aromaticity  0.142857143

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  32

X logP energy  -5.7045

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.