SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB39062

Signal sequence   MSSSNFSCILSISLTFFILLLNKVNS

Length  26

Organism  Medicago truncatula (Barrel medic) (Medicago tribuloides)

UniProt ID  Q01807,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB39062.cif

Structure  SPKB39062.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2879.42224

Aliphatic index  131.1538462

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  1107.95

Aromaticity  0.115384615

Average rotatable bonds  3.692307692

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  41

X logP energy  -10.9638

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.